U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    1110032F04Rik RIKEN cDNA 1110032F04 gene [ Mus musculus (house mouse) ]

    Gene ID: 68725, updated on 2-Nov-2024

    Summary

    Official Symbol
    1110032F04Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1110032F04 geneprovided by MGI
    Primary source
    MGI:MGI:1915975
    See related
    Ensembl:ENSMUSG00000046999 AllianceGenome:MGI:1915975
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to be located in membrane. Orthologous to human C3orf80 (chromosome 3 open reading frame 80). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See 1110032F04Rik in Genome Data Viewer
    Location:
    3 E1; 3 32.06 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (68776684..68779496)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (68869586..68872163)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 35584 Neighboring gene STARR-seq mESC enhancer starr_07913 Neighboring gene spermine synthase pseudogene Neighboring gene STARR-seq mESC enhancer starr_07914 Neighboring gene intraflagellar transport 80 Neighboring gene oxysterol binding protein-like 9 pseudogene Neighboring gene STARR-seq mESC enhancer starr_07915 Neighboring gene STARR-seq mESC enhancer starr_07916 Neighboring gene STARR-seq mESC enhancer starr_07917 Neighboring gene STARR-positive B cell enhancer ABC_E3436 Neighboring gene microRNA 15b Neighboring gene structural maintenance of chromosomes 4

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized membrane protein C3orf80 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001167996.2NP_001161468.1  uncharacterized membrane protein C3orf80 homolog precursor

      See identical proteins and their annotated locations for NP_001161468.1

      Status: VALIDATED

      Source sequence(s)
      AC115062
      Consensus CDS
      CCDS50931.1
      UniProtKB/Swiss-Prot
      E9Q0B3, Q8C4H3
      Related
      ENSMUSP00000056782.3, ENSMUST00000054551.3
      Conserved Domains (1) summary
      pfam15843
      Location:46247
      DUF4719; Domain of unknown function (DUF4719)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      68776684..68779496
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)