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    SBF1P1 SET binding factor 1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100133234, updated on 17-Sep-2024

    Summary

    Official Symbol
    SBF1P1provided by HGNC
    Official Full Name
    SET binding factor 1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:31098
    See related
    Ensembl:ENSG00000248522 AllianceGenome:HGNC:31098
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See SBF1P1 in Genome Data Viewer
    Location:
    8q12.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (55449197..55455321, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (55826770..55832894, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (56361757..56367881, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986886 Neighboring gene uncharacterized LOC107986887 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr8:55991285-55992111 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19200 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:56014243-56014910 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56015579-56016244 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:56040789-56041681 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56054033-56054534 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56054535-56055034 Neighboring gene uncharacterized LOC105375844 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:56082878-56083063 Neighboring gene XK related 4 Neighboring gene Sharpr-MPRA regulatory region 131 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:56170973-56172172 Neighboring gene NANOG hESC enhancer GRCh37_chr8:56226088-56226589 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56276417-56277111 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56277806-56278500 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56280453-56280954 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:56285036-56285662 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:56285663-56286288 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:56366282-56366665 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27373 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27374 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27375 Neighboring gene XKR4 antisense RNA 1 Neighboring gene uncharacterized LOC105375845

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association study identifies a novel susceptibility gene for serum TSH levels in Chinese populations.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027765.2 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AF165144, KF458760, KF459911
      Related
      ENST00000444527.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      55449197..55455321 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      55826770..55832894 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)