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    SLC35G4 solute carrier family 35 member G4 [ Homo sapiens (human) ]

    Gene ID: 646000, updated on 2-May-2024

    Summary

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    Official Symbol
    SLC35G4provided by HGNC
    Official Full Name
    solute carrier family 35 member G4provided by HGNC
    Primary source
    HGNC:HGNC:31043
    See related
    Ensembl:ENSG00000236396 AllianceGenome:HGNC:31043
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    AMAC1L1; SLC35G4P
    Summary
    Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See SLC35G4 in Genome Data Viewer
    Location:
    18p11.21
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (11609596..11610612)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (11771916..11772932)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (11609595..11610611)

    Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985173 Neighboring gene long intergenic non-protein coding RNA 1928 Neighboring gene long intergenic non-protein coding RNA 1255 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:11519045-11519545 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9299 Neighboring gene nuclear pore complex interacting protein family member B1, pseudogene Neighboring gene microRNA 7153

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Emergence of primate genes by retrotransposon-mediated sequence transduction. Xing J, et al. Proc Natl Acad Sci U S A, 2006 Nov 21. PMID 17101974, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Find tests for this gene in the NIH Genetic Testing Registry (GTR)

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Homology

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative solute carrier family 35 member G4
    Names
    acyl-malonyl-condensing enzyme 1-like protein 1
    protein AMAC1L1
    putative solute carrier family 35 member G4 pseudogene
    solute carrier family 35, member G4, pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282300.2 → NP_001269229.1  putative solute carrier family 35 member G4

      See identical proteins and their annotated locations for NP_001269229.1

      Status: VALIDATED

      Source sequence(s)
      AP001120
      Consensus CDS
      CCDS82241.1
      UniProtKB/Swiss-Prot
      P0C7Q5
      Related
      ENSP00000490812.1, ENST00000588001.2
      Conserved Domains (2) summary
      COG0697
      Location:52 → 326
      RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
      cl23754
      Location:221 → 324
      EamA; EamA-like transporter family

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

      Range
      11609596..11610612
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060942.1 Alternate T2T-CHM13v2.0

      Range
      11771916..11772932
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0C7Q5.1 GenPept UniProtKB/Swiss-Prot:P0C7Q5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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