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    Tex19.1 testis expressed gene 19.1 [ Mus musculus (house mouse) ]

    Gene ID: 73679, updated on 28-Oct-2024

    Summary

    Official Symbol
    Tex19.1provided by MGI
    Official Full Name
    testis expressed gene 19.1provided by MGI
    Primary source
    MGI:MGI:1920929
    See related
    Ensembl:ENSMUSG00000039329 AllianceGenome:MGI:1920929
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tex19; Tex19a; mTex19.1; 2410081M02Rik
    Summary
    Enables piRNA binding activity. Involved in meiotic nuclear division; retrotransposon silencing; and spermatogenesis. Acts upstream of or within several processes, including homologous chromosome pairing at meiosis; male gonad development; and spongiotrophoblast cell proliferation. Located in cytoplasm and nucleus. Is expressed in several structures, including blastocyst; brain; early embryo; gonad; and tooth. Orthologous to human TEX19 (testis expressed 19). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Restricted expression toward placenta adult (RPKM 31.5) See more
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    Genomic context

    See Tex19.1 in Genome Data Viewer
    Location:
    11 E2; 11 85.0 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (121036969..121039140)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (121146143..121148314)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene 11793 Neighboring gene testis expressed gene 19.2 Neighboring gene STARR-seq mESC enhancer starr_31377 Neighboring gene urotensin 2 receptor Neighboring gene bromodomain containing 4 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (10)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables piRNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within cell proliferation involved in embryonic placenta development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within homologous chromosome pairing at meiosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within in utero embryonic development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in male gonad development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within male gonad development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in male meiotic nuclear division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in placenta development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within placenta development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within post-transcriptional regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in reciprocal meiotic recombination IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of retrotransposition IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within retrotransposon silencing IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in retrotransposon silencing IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in retrotransposon silencing ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within sexual reproduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in spermatogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within spongiotrophoblast cell proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    testis-expressed protein 19.1
    Names
    testis expressed gene 19
    testis-expressed protein 19A
    testis-expressed sequence 19A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028602.3NP_082878.2  testis-expressed protein 19.1

      See identical proteins and their annotated locations for NP_082878.2

      Status: VALIDATED

      Source sequence(s)
      AL662887
      Consensus CDS
      CCDS25768.1
      UniProtKB/Swiss-Prot
      Q7TPF0, Q99MV2
      Related
      ENSMUSP00000048592.9, ENSMUST00000039088.9
      Conserved Domains (1) summary
      pfam15553
      Location:1164
      TEX19; Testis-expressed protein 19

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      121036969..121039140
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)