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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001293673.2 → NP_001280602.1 neuroplastin isoform 2 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 3. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 3.
- Source sequence(s)
-
CT030640
- Consensus CDS
-
CCDS81009.1
- Related
- ENSMUSP00000135541.2, ENSMUST00000176557.8
- Conserved Domains (1) summary
-
- cl11960
Location:133 → 216
- Ig; Immunoglobulin domain
-
NM_001357751.2 → NP_001344680.1 neuroplastin isoform 3 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).
- Source sequence(s)
-
CT030640
- Conserved Domains (2) summary
-
- cd00096
Location:48 → 121
- Ig; Immunoglobulin domain
- cl11960
Location:249 → 332
- Ig; Immunoglobulin domain
-
NM_001406062.1 → NP_001392991.1 neuroplastin isoform 4 precursor
Status: VALIDATED
- Source sequence(s)
-
CT030640
- UniProtKB/Swiss-Prot
- P97300, Q3U519, Q8C637, Q8C6H8
-
NM_009145.3 → NP_033171.2 neuroplastin isoform 1 precursor
See identical proteins and their annotated locations for NP_033171.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) lacks an alternate in-frame exon and uses an alternate in-frame splice junction compared to variant 3. The resulting isoform (1) has the same N- and C-termini but is shorter compared to isoform 3.
- Source sequence(s)
-
CT030640
- Consensus CDS
-
CCDS23245.1
- Related
- ENSMUSP00000082793.6, ENSMUST00000085651.12
- Conserved Domains (1) summary
-
- cl11960
Location:133 → 216
- Ig; Immunoglobulin domain
RNA
-
NR_151824.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an alternate exon and uses two alternate splice junctions compared to variant 3. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
CT030640