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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001113360.3 → NP_001106831.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform b
See identical proteins and their annotated locations for NP_001106831.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) encodes the longest isoform (b).
- Source sequence(s)
-
AL831788, BX004788
- Consensus CDS
-
CCDS71533.1
- UniProtKB/Swiss-Prot
- A2AP18, A6PWW5, Q3LUA7, Q4QSC7, Q80WP6, Q8BJV1, Q8BWU4, Q8BXN5, Q8CFR1
- UniProtKB/TrEMBL
-
H3BK11
- Related
- ENSMUSP00000101256.3, ENSMUST00000105631.9
- Conserved Domains (8) summary
-
- cd00275
Location:838 → 963
- C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
- cd08633
Location:399 → 808
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02952
Location:316 → 948
- PLN02952; phosphoinositide phospholipase C
- cd00051
Location:247 → 313
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
- cd13364
Location:123 → 229
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- pfam00169
Location:141 → 229
- PH; PH domain
- pfam09279
Location:317 → 399
- EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
- pfam13499
Location:248 → 309
- EF-hand_7; EF-hand domain pair
-
NM_001356470.1 → NP_001343399.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform c
Status: VALIDATED
- Source sequence(s)
-
AK044619, AL831788, BC052329, BC060083, BX004788, CJ113070, DQ176851
- UniProtKB/TrEMBL
-
H3BIW6
- Related
- ENSMUSP00000134750.2, ENSMUST00000176194.8
- Conserved Domains (6) summary
-
- cd08633
Location:318 → 727
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- cd13364
Location:22 → 128
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:146 → 175
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl26464
Location:916 → 1092
- Atrophin-1; Atrophin-1 family
- cl27705
Location:288 → 867
- PI-PLC-Y; Phosphatidylinositol-specific phospholipase C, Y domain
- cl28895
Location:146 → 306
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
NM_175556.5 → NP_780765.2 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform a
See identical proteins and their annotated locations for NP_780765.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) uses an alternate splice site and contains an alternate exon in the 3' coding region, resulting in an early stop codon, compared to variant 1. It encodes isoform a, which is shorter and has a distinct C-terminus, compared to isoform b.
- Source sequence(s)
-
AL831788, BX004788
- Consensus CDS
-
CCDS38990.2
- UniProtKB/TrEMBL
- F7C3A0, F8VQ50, H3BIW6
- Related
- ENSMUSP00000122704.3, ENSMUST00000139976.9
- Conserved Domains (8) summary
-
- cd00275
Location:838 → 963
- C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
- cd08633
Location:399 → 808
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02952
Location:316 → 948
- PLN02952; phosphoinositide phospholipase C
- cd00051
Location:247 → 313
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
- cd13364
Location:123 → 229
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- pfam00169
Location:141 → 229
- PH; PH domain
- pfam09279
Location:317 → 399
- EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
- pfam13499
Location:248 → 309
- EF-hand_7; EF-hand domain pair
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000070.7 Reference GRCm39 C57BL/6J
- Range
-
155067572..155148548 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011250270.1 → XP_011248572.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X4
See identical proteins and their annotated locations for XP_011248572.1
- Conserved Domains (6) summary
-
- cd08633
Location:336 → 745
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:306 → 885
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:934 → 1426
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:40 → 146
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:164 → 193
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:164 → 324
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
XM_011250271.4 → XP_011248573.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X4
See identical proteins and their annotated locations for XP_011248573.1
- Conserved Domains (6) summary
-
- cd08633
Location:336 → 745
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:306 → 885
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:934 → 1426
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:40 → 146
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:164 → 193
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:164 → 324
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
XM_006538940.2 → XP_006539003.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X7
- Related
- ENSMUSP00000118292.3, ENSMUST00000135665.9
- Conserved Domains (5) summary
-
- cd08633
Location:469 → 878
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:391 → 1018
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:1065 → 1391
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd16221
Location:317 → 457
- EFh_PI-PLCeta2; EF-hand motif found in phosphoinositide phospholipase C eta 2 (PI-PLC-eta2)
-
XM_036164167.1 → XP_036020060.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X12
- UniProtKB/TrEMBL
-
H3BIW6
- Conserved Domains (4) summary
-
- cd08633
Location:469 → 878
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:391 → 1018
- PLN02228; Phosphoinositide phospholipase C
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd16221
Location:317 → 457
- EFh_PI-PLCeta2; EF-hand motif found in phosphoinositide phospholipase C eta 2 (PI-PLC-eta2)
-
XM_006538936.2 → XP_006538999.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X2
- Conserved Domains (5) summary
-
- cd08633
Location:469 → 878
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:391 → 1018
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:1067 → 1559
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd16221
Location:317 → 457
- EFh_PI-PLCeta2; EF-hand motif found in phosphoinositide phospholipase C eta 2 (PI-PLC-eta2)
-
XM_017320247.1 → XP_017175736.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X9
- UniProtKB/TrEMBL
-
H3BIW6
- Conserved Domains (5) summary
-
- cd08633
Location:469 → 878
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:391 → 1018
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:1067 → 1243
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd16221
Location:317 → 457
- EFh_PI-PLCeta2; EF-hand motif found in phosphoinositide phospholipase C eta 2 (PI-PLC-eta2)
-
XM_011250272.1 → XP_011248574.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X5
- Conserved Domains (6) summary
-
- cd08633
Location:489 → 898
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:459 → 1038
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:1085 → 1411
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:317 → 346
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:317 → 477
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
XM_011250276.2 → XP_011248578.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X11
- UniProtKB/TrEMBL
-
H3BIW6
- Conserved Domains (5) summary
-
- cd08633
Location:489 → 898
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:459 → 1038
- PLN02228; Phosphoinositide phospholipase C
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:317 → 346
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:317 → 477
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
XM_036164166.1 → XP_036020059.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X11
- UniProtKB/TrEMBL
-
H3BIW6
- Conserved Domains (5) summary
-
- cd08633
Location:489 → 898
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:459 → 1038
- PLN02228; Phosphoinositide phospholipase C
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:317 → 346
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:317 → 477
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
XM_011250268.1 → XP_011248570.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X1
- Conserved Domains (6) summary
-
- cd08633
Location:489 → 898
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:459 → 1038
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:1087 → 1579
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:317 → 346
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:317 → 477
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
XM_011250274.2 → XP_011248576.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X8
- UniProtKB/TrEMBL
-
H3BIW6
- Conserved Domains (6) summary
-
- cd08633
Location:489 → 898
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:459 → 1038
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:1087 → 1263
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:317 → 346
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:317 → 477
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
XM_011250269.2 → XP_011248571.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X3
- Conserved Domains (6) summary
-
- cd08633
Location:341 → 750
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:311 → 890
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:939 → 1431
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:45 → 151
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:169 → 198
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:169 → 329
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
XM_011250273.3 → XP_011248575.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X6
- Conserved Domains (6) summary
-
- cd08633
Location:318 → 727
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:288 → 867
- PLN02228; Phosphoinositide phospholipase C
- PHA03247
Location:916 → 1408
- PHA03247; large tegument protein UL36; Provisional
- cd13364
Location:22 → 128
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:146 → 175
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:146 → 306
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
-
XM_011250275.2 → XP_011248577.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X10
- Conserved Domains (5) summary
-
- cd08633
Location:489 → 898
- PI-PLCc_eta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2
- PLN02228
Location:459 → 1038
- PLN02228; Phosphoinositide phospholipase C
- cd13364
Location:193 → 299
- PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
- cd15898
Location:317 → 346
- EFh_PI-PLC; EF-hand motif [structural motif]
- cl28895
Location:317 → 477
- EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
RNA
-
XR_004941911.1 RNA Sequence
-
XR_004941914.1 RNA Sequence
-
XR_004941913.1 RNA Sequence
-
XR_001784150.1 RNA Sequence
-
XR_004941912.1 RNA Sequence
-
XR_881430.1 RNA Sequence