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    Fmo9 flavin containing monooxygenase 9 [ Mus musculus (house mouse) ]

    Gene ID: 240894, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Fmo9provided by MGI
    Official Full Name
    flavin containing monooxygenase 9provided by MGI
    Primary source
    MGI:MGI:3606068
    See related
    Ensembl:ENSMUSG00000026560 AllianceGenome:MGI:3606068
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4831428F09Rik
    Summary
    Predicted to enable N,N-dimethylaniline monooxygenase activity. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Fmo9 in Genome Data Viewer
    Location:
    1 H2.3; 1 74.03 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (166489624..166509414, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (166662055..166681845, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene 4846 Neighboring gene predicted gene 4847 Neighboring gene STARR-positive B cell enhancer mm9_chr1:168668136-168668437 Neighboring gene SNW domain containing 1 pseudogene Neighboring gene predicted gene, 33404

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables N,N-dimethylaniline monooxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    flavin containing monooxygenase 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347135.1 → NP_001334064.1  flavin containing monooxygenase 9 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC140979, BC111885
      Consensus CDS
      CCDS83628.1
      UniProtKB/TrEMBL
      Q14DP9, Q14DT3
      Related
      ENSMUSP00000114750.2, ENSMUST00000148677.2

    2. NM_172844.2 → NP_766432.1  flavin containing monooxygenase 9 isoform 1

      See identical proteins and their annotated locations for NP_766432.1

      Status: VALIDATED

      Source sequence(s)
      AK029219
      Consensus CDS
      CCDS15453.1
      UniProtKB/TrEMBL
      Q14DP9, Q8C116
      Related
      ENSMUSP00000027843.4, ENSMUST00000027843.11
      Conserved Domains (3) summary
      pfam00743
      Location:3 → 531
      FMO-like; Flavin-binding monooxygenase-like
      pfam13450
      Location:8 → 42
      NAD_binding_8; NAD(P)-binding Rossmann-like domain
      cl21454
      Location:90 → 342
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      166489624..166509414 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006496853.1 → XP_006496916.1  flavin containing monooxygenase 9 isoform X1

      UniProtKB/TrEMBL
      Q14DP9
      Conserved Domains (1) summary
      pfam00743
      Location:3 → 526
      FMO-like; Flavin-binding monooxygenase-like
    Nucleotide Protein Strain
    Heading Accession and Version

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