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    Gm4871 predicted gene 4871 [ Mus musculus (house mouse) ]

    Gene ID: 231885, updated on 17-Aug-2024

    Summary

    Official Symbol
    Gm4871provided by MGI
    Official Full Name
    predicted gene 4871provided by MGI
    Primary source
    MGI:MGI:3648713
    See related
    Ensembl:ENSMUSG00000061707 AllianceGenome:MGI:3648713
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG231885
    Expression
    Restricted expression toward testis adult (RPKM 72.5) See more
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    Genomic context

    See Gm4871 in Genome Data Viewer
    Location:
    5 G2; 5 84.95 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (144966410..144969574, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (145029600..145032764, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene SMAD specific E3 ubiquitin protein ligase 1 Neighboring gene predicted gene, 33821 Neighboring gene STARR-positive B cell enhancer ABC_E10365 Neighboring gene karyopherin subunit alpha 7 Neighboring gene predicted gene, 33904 Neighboring gene RIKEN cDNA 1700018F24 gene Neighboring gene STARR-seq mESC enhancer starr_14822 Neighboring gene actin related protein 2/3 complex, subunit 1A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC231885

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101463.1NP_001094933.1  uncharacterized protein LOC231885

      See identical proteins and their annotated locations for NP_001094933.1

      Status: PREDICTED

      Source sequence(s)
      AC113295
      Consensus CDS
      CCDS51695.1
      UniProtKB/TrEMBL
      D3Z0W7, Q9DA78
      Related
      ENSMUSP00000071368.5, ENSMUST00000071421.6
      Conserved Domains (1) summary
      cd06224
      Location:63176
      REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      144966410..144969574 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)