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    Alox8 arachidonate 8-lipoxygenase [ Mus musculus (house mouse) ]

    Gene ID: 11688, updated on 2-Nov-2024

    Summary

    Official Symbol
    Alox8provided by MGI
    Official Full Name
    arachidonate 8-lipoxygenaseprovided by MGI
    Primary source
    MGI:MGI:1098228
    See related
    Ensembl:ENSMUSG00000020891 AllianceGenome:MGI:1098228
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    8-LOX; 8S-LOX; Alox15b; 15-LOX-2; 15-LOX-B
    Summary
    This gene belongs to the lipoxygenase (LOX) gene family whose members encode enzymes that catalyze the addition of molecular oxygen to polyunsaturated fatty acids (PUFAs) to yield fatty acid hydroperoxides. The encoded enzyme preferentially metabolizes arachidonic acid to yield 8-hydroxyeicosatetraenoic acid (8-HETE), while metabolizing linoleic acid less efficiently. The gene may also function as a tumor suppressor. This gene is located in a cluster of related genes that spans approximately 75 kilobases on chromosome 11. [provided by RefSeq, Jan 2013]
    Expression
    Biased expression in cerebellum adult (RPKM 1.1), cortex adult (RPKM 0.5) and 6 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Alox8 in Genome Data Viewer
    Location:
    11 B3; 11 42.38 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (69074711..69088669, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (69183885..69197843, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2995 Neighboring gene arachidonate lipoxygenase 3 Neighboring gene arachidonate 12-lipoxygenase, 12R type Neighboring gene guanylate cyclase 2e Neighboring gene STARR-positive B cell enhancer ABC_E8418 Neighboring gene predicted gene, 23194

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (5) 
    • Targeted (1) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables arachidonate 15-lipoxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables arachidonate 15-lipoxygenase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables arachidonate 15-lipoxygenase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables arachidonate 8(S)-lipoxygenase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables calcium ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables iron ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables linoleate 13S-lipoxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables linoleate 13S-lipoxygenase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables linoleate 9S-lipoxygenase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in arachidonate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in arachidonate metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in arachidonate metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cannabinoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cannabinoid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in endocannabinoid signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in endocannabinoid signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in hepoxilin biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in hepoxilin biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in linoleic acid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in linoleic acid metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in lipid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in lipid oxidation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in lipid oxidation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in lipoxin A4 biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in lipoxin A4 biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in lipoxygenase pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in lipoxygenase pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in lipoxygenase pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cell cycle ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of growth IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of growth ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phospholipid metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in phospholipid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of chemokine production IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of chemokine production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of keratinocyte differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of macrophage derived foam cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of macrophage derived foam cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of peroxisome proliferator activated receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
     
    located_in adherens junction ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
     
    located_in focal adhesion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    polyunsaturated fatty acid lipoxygenase ALOX8
    Names
    15-lipoxygenase 2
    8S-lipoxygenase
    arachidonate 15-lipoxygenase B
    arachidonate 15-lipoxygenase type II
    arachidonate 15-lipoxygenase, second type
    arachidonate 8S-lipoxygenase
    linoleate 9S-lipoxygenase ALOX8
    NP_033791.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009661.4NP_033791.1  polyunsaturated fatty acid lipoxygenase ALOX8

      See identical proteins and their annotated locations for NP_033791.1

      Status: REVIEWED

      Source sequence(s)
      AK028724, AL645527
      Consensus CDS
      CCDS24886.1
      UniProtKB/Swiss-Prot
      B1ASX5, O35936
      UniProtKB/TrEMBL
      B1ASX6
      Related
      ENSMUSP00000021262.4, ENSMUST00000021262.10
      Conserved Domains (2) summary
      cd01753
      Location:5122
      PLAT_LOX; PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and ...
      pfam00305
      Location:230668
      Lipoxygenase; Lipoxygenase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      69074711..69088669 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)