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    Gm38462 predicted gene, 38462 [ Mus musculus (house mouse) ]

    Gene ID: 102634284, updated on 22-Oct-2024

    Summary

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    Official Symbol
    Gm38462provided by MGI
    Official Full Name
    predicted gene, 38462provided by MGI
    Primary source
    MGI:MGI:5621347
    See related
    Ensembl:ENSMUSG00000052371 AllianceGenome:MGI:5621347
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hoxd3os1
    Expression
    Biased expression in ovary adult (RPKM 18.2), adrenal adult (RPKM 18.0) and 9 other tissues See more
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    Genomic context

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    See Gm38462 in Genome Data Viewer
    Location:
    2 C3; 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (74533347..74542402, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (74703003..74712058, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene homeobox D11 Neighboring gene STARR-seq mESC enhancer starr_04854 Neighboring gene homeobox D10 Neighboring gene homeobox D9 Neighboring gene homeobox D8 Neighboring gene homeobox D3, opposite strand 1 Neighboring gene homeobox D3 Neighboring gene homeobox D4 Neighboring gene STARR-seq mESC enhancer starr_04856 Neighboring gene microRNA 10b Neighboring gene Hoxd antisense growth associated long non-coding RNA Neighboring gene predicted gene 14424

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_164327.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL928644
      Related
      ENSMUST00000132326.3

    2. NR_164328.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL928644
      Related
      ENSMUST00000371854.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      74533347..74542402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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