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    Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 [ Mus musculus (house mouse) ]

    Gene ID: 225887, updated on 3-Nov-2024

    Summary

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    Official Symbol
    Ndufs8provided by MGI
    Official Full Name
    NADH:ubiquinone oxidoreductase core subunit S8provided by MGI
    Primary source
    MGI:MGI:2385079
    See related
    Ensembl:ENSMUSG00000059734 AllianceGenome:MGI:2385079
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TYKY; CI-23kD
    Summary
    Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to contribute to NADH dehydrogenase activity. Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone; mitochondrial respiratory chain complex I assembly; and response to oxidative stress. Located in mitochondrion. Part of respiratory chain complex I. Is expressed in several structures, including early conceptus and oocyte. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 2. Orthologous to human NDUFS8 (NADH:ubiquinone oxidoreductase core subunit S8). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in kidney adult (RPKM 181.5), heart adult (RPKM 175.6) and 28 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Ndufs8 in Genome Data Viewer
    Location:
    19 A; 19 3.63 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (3958863..3962774, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (3908863..3912774, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr19:3851584-3851885 Neighboring gene STARR-seq mESC enhancer starr_45333 Neighboring gene choline kinase alpha Neighboring gene STARR-seq mESC enhancer starr_45334 Neighboring gene T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 Neighboring gene STARR-positive B cell enhancer ABC_E9987 Neighboring gene aldehyde dehydrogenase 3 family, member B1 Neighboring gene predicted gene, 42059 Neighboring gene STARR-positive B cell enhancer ABC_E7624 Neighboring gene unc-93 homolog B1, TLR signaling regulator Neighboring gene STARR-seq mESC enhancer starr_45335

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The requirement of the mitochondrial protein NDUFS8 for angiogenesis.
      Title: The requirement of the mitochondrial protein NDUFS8 for angiogenesis.
    Submit: New GeneRIF Correction

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Clone Names

    • MGC37950, MGC101957

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    contributes_to NADH dehydrogenase (ubiquinone) activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables NADH dehydrogenase (ubiquinone) activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables NADH dehydrogenase (ubiquinone) activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    contributes_to NADH dehydrogenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables NADH dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    contributes_to NADH dehydrogenase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aerobic respiration NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in mitochondrial electron transport, NADH to ubiquinone IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mitochondrial electron transport, NADH to ubiquinone ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in mitochondrial electron transport, NADH to ubiquinone ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in mitochondrial respiratory chain complex I assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mitochondrial respiratory chain complex I assembly ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in mitochondrial respiratory chain complex I assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in proton motive force-driven mitochondrial ATP synthesis NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to oxidative stress ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
    		  
    part_of respiratory chain complex I IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of respiratory chain complex I IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of respiratory chain complex I ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
    Names
    NADH dehydrogenase (ubiquinone) Fe-S protein 8
    NADH-ubiquinone oxidoreductase 23 kDa subunit
    complex I-23kD
    NP_001258372.1
    NP_001258373.1
    NP_659119.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001271443.1 → NP_001258372.1  NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

      See identical proteins and their annotated locations for NP_001258372.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice site in the 5' UTR, compared to variant 1. Variants 1, 2, and 3 encode the same protein.
      Source sequence(s)
      AK135069, AK164901, BP775598
      Consensus CDS
      CCDS29402.1
      UniProtKB/Swiss-Prot
      Q8K3J1
      UniProtKB/TrEMBL
      Q3UY05, Q5M9P5, Q8VC72
      Related
      ENSMUSP00000158327.2, ENSMUST00000237341.2
      Conserved Domains (1) summary
      PRK05888
      Location:56 → 212
      PRK05888; NADH-quinone oxidoreductase subunit NuoI

    2. NM_001271444.1 → NP_001258373.1  NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

      See identical proteins and their annotated locations for NP_001258373.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) uses an alternate splice site in the 5' UTR, compared to variant 1. Variants 1, 2, and 3 encode the same protein.
      Source sequence(s)
      AK135069, AK149674, BP775598
      Consensus CDS
      CCDS29402.1
      UniProtKB/Swiss-Prot
      Q8K3J1
      UniProtKB/TrEMBL
      Q3UY05, Q5M9P5, Q8VC72
      Related
      ENSMUSP00000158029.2, ENSMUST00000235847.2
      Conserved Domains (1) summary
      PRK05888
      Location:56 → 212
      PRK05888; NADH-quinone oxidoreductase subunit NuoI

    3. NM_144870.5 → NP_659119.2  NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

      See identical proteins and their annotated locations for NP_659119.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, and 3 encode the same protein.
      Source sequence(s)
      AK135069, AK153182, BP775598
      Consensus CDS
      CCDS29402.1
      UniProtKB/Swiss-Prot
      Q8K3J1
      UniProtKB/TrEMBL
      Q3UY05, Q5M9P5, Q8VC72
      Related
      ENSMUSP00000074600.7, ENSMUST00000075092.8
      Conserved Domains (1) summary
      PRK05888
      Location:56 → 212
      PRK05888; NADH-quinone oxidoreductase subunit NuoI

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      3958863..3962774 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8K3J1.1 GenPept UniProtKB/Swiss-Prot:Q8K3J1

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