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    thap4 THAP domain containing 4 [ Danio rerio (zebrafish) ]

    Gene ID: 567037, updated on 2-Nov-2024

    Summary

    Official Symbol
    thap4provided by ZNC
    Official Full Name
    THAP domain containing 4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070912-5
    See related
    Ensembl:ENSDARG00000077323 AllianceGenome:ZFIN:ZDB-GENE-070912-5
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    nitrobindin; si:ch211-105d4.5
    Summary
    Enables nitric oxide binding activity. Orthologous to human THAP4 (THAP domain containing 4). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See thap4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (22653123..22659453, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (22997472..23003816, complement)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 25b Neighboring gene BCL2 family apoptosis regulator BOK b Neighboring gene zgc:161973 Neighboring gene alanine--glyoxylate and serine--pyruvate aminotransferase b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    peroxynitrite isomerase THAP4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001128736.3NP_001122208.1  peroxynitrite isomerase THAP4

      See identical proteins and their annotated locations for NP_001122208.1

      Status: VALIDATED

      Source sequence(s)
      BC162373, BX897733, EH478746
      UniProtKB/TrEMBL
      B0S7M2, B3DGE9
      Related
      ENSDARP00000104190.2, ENSDART00000115025.3
      Conserved Domains (1) summary
      pfam08768
      Location:14167
      DUF1794; Domain of unknown function (DUF1794)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      22653123..22659453 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068224707.1XP_068080808.1  peroxynitrite isomerase THAP4 isoform X1

      Related
      ENSDARP00000144630.1, ENSDART00000174742.2