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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001076778.3 → NP_001070246.1 actin-associated protein FAM107A isoform a
See identical proteins and their annotated locations for NP_001070246.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Both variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AF089853, AL050264, BX645008, EU569833
- Consensus CDS
-
CCDS2892.1
- UniProtKB/Swiss-Prot
- B3KNQ4, B7ZAY5, J3KR61, O95990, Q96NH4
- UniProtKB/TrEMBL
- B3KY74, Q6IAM1
- Related
- ENSP00000354270.2, ENST00000360997.7
- Conserved Domains (1) summary
-
- pfam06625
Location:23 → 133
- DUF1151; Protein of unknown function (DUF1151)
-
NM_001282713.2 → NP_001269642.1 actin-associated protein FAM107A isoform b
See identical proteins and their annotated locations for NP_001269642.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and 5' coding region, compared to variant 1. The encoded isoform (b) has a longer N-terminus, compared to isoform a.
- Source sequence(s)
-
AF089853, DB486334, EU569833
- Consensus CDS
-
CCDS63672.1
- UniProtKB/TrEMBL
-
B4DNP5
- Related
- ENSP00000400858.2, ENST00000447756.2
- Conserved Domains (1) summary
-
- pfam06625
Location:51 → 161
- DUF1151; Protein of unknown function (DUF1151)
-
NM_001282714.2 → NP_001269643.1 actin-associated protein FAM107A isoform c
See identical proteins and their annotated locations for NP_001269643.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and 5' coding region, compared to variant 1. The encoded isoform (c) has a longer N-terminus, compared to isoform a.
- Source sequence(s)
-
AF089853, DA277819, DT216507, EU569833
- Consensus CDS
-
CCDS63673.1
- UniProtKB/TrEMBL
-
B3KY74
- Related
- ENSP00000419124.1, ENST00000474531.5
- Conserved Domains (1) summary
-
- pfam06625
Location:54 → 164
- DUF1151; Protein of unknown function (DUF1151)
-
NM_007177.4 → NP_009108.1 actin-associated protein FAM107A isoform a
See identical proteins and their annotated locations for NP_009108.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the shortest isoform (a). Both variants 1 and 2 encode the same isoform.
- Source sequence(s)
-
AF089853, BC010561, BX645008, EU569833
- Consensus CDS
-
CCDS2892.1
- UniProtKB/Swiss-Prot
- B3KNQ4, B7ZAY5, J3KR61, O95990, Q96NH4
- UniProtKB/TrEMBL
- B3KY74, Q6IAM1
- Related
- ENSP00000377991.1, ENST00000394481.5
- Conserved Domains (1) summary
-
- pfam06625
Location:23 → 133
- DUF1151; Protein of unknown function (DUF1151)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
58564117..58627610 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047447370.1 → XP_047303326.1 actin-associated protein FAM107A isoform X1
- UniProtKB/Swiss-Prot
- B3KNQ4, B7ZAY5, J3KR61, O95990, Q96NH4
- UniProtKB/TrEMBL
-
Q6IAM1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
58604489..58667988 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054345087.1 → XP_054201062.1 actin-associated protein FAM107A isoform X1
- UniProtKB/Swiss-Prot
- B3KNQ4, B7ZAY5, J3KR61, O95990, Q96NH4
- UniProtKB/TrEMBL
-
Q6IAM1