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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_053005.1 RefSeqGene
- Range
-
6764..261446
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001139466.1 → NP_001132938.1 F-box-like/WD repeat-containing protein TBL1X isoform a
See identical proteins and their annotated locations for NP_001132938.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode isoform a.
- Source sequence(s)
-
AC003036, AK289409, AK290962, BC052304
- Consensus CDS
-
CCDS14133.1
- UniProtKB/Swiss-Prot
- A8K044, A8K4J7, O60907, Q86UY2
- UniProtKB/TrEMBL
-
A0A2R8YFW3
- Related
- ENSP00000385988.2, ENST00000407597.7
- Conserved Domains (4) summary
-
- COG2319
Location:215 → 577
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:227 → 533
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam08513
Location:57 → 83
- LisH; LisH
- sd00039
Location:235 → 282
- 7WD40; WD40 repeat [structural motif]
-
NM_001139467.1 → NP_001132939.1 F-box-like/WD repeat-containing protein TBL1X isoform b
See identical proteins and their annotated locations for NP_001132939.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and lacks the alternate first coding exon compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 3 and 4 both encode isoform b.
- Source sequence(s)
-
AC003036, AK289409, BC052304
- Consensus CDS
-
CCDS48078.1
- UniProtKB/TrEMBL
-
A0A2R8YFW3
- Related
- ENSP00000394097.1, ENST00000424279.6
- Conserved Domains (4) summary
-
- COG2319
Location:164 → 526
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:176 → 482
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam08513
Location:6 → 32
- LisH; LisH
- sd00039
Location:184 → 231
- 7WD40; WD40 repeat [structural motif]
-
NM_001139468.1 → NP_001132940.1 F-box-like/WD repeat-containing protein TBL1X isoform b
See identical proteins and their annotated locations for NP_001132940.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and lacks the alternate first coding exon compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 3 and 4 both encode isoform b.
- Source sequence(s)
-
AC003036, AK289409, BC032708, BC052304
- Consensus CDS
-
CCDS48078.1
- UniProtKB/TrEMBL
-
A0A2R8YFW3
- Related
- ENSP00000370348.1, ENST00000380961.5
- Conserved Domains (4) summary
-
- COG2319
Location:164 → 526
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:176 → 482
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam08513
Location:6 → 32
- LisH; LisH
- sd00039
Location:184 → 231
- 7WD40; WD40 repeat [structural motif]
-
NM_005647.4 → NP_005638.1 F-box-like/WD repeat-containing protein TBL1X isoform a
See identical proteins and their annotated locations for NP_005638.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a). Variants 1 and 2 both encode isoform a.
- Source sequence(s)
-
AC003036, AC073488, BC052304
- Consensus CDS
-
CCDS14133.1
- UniProtKB/Swiss-Prot
- A8K044, A8K4J7, O60907, Q86UY2
- UniProtKB/TrEMBL
-
A0A2R8YFW3
- Related
- ENSP00000496215.1, ENST00000645353.2
- Conserved Domains (4) summary
-
- COG2319
Location:215 → 577
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:227 → 533
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam08513
Location:57 → 83
- LisH; LisH
- sd00039
Location:235 → 282
- 7WD40; WD40 repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
9463295..9719740
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
9045885..9302376
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)