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    KLK7 kallikrein related peptidase 7 [ Homo sapiens (human) ]

    Gene ID: 5650, updated on 14-Nov-2024

    Summary

    Official Symbol
    KLK7provided by HGNC
    Official Full Name
    kallikrein related peptidase 7provided by HGNC
    Primary source
    HGNC:HGNC:6368
    See related
    Ensembl:ENSG00000169035 MIM:604438; AllianceGenome:HGNC:6368
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    hK7; SCCE; PRSS6
    Summary
    This gene encodes a member of the kallikrein subfamily of serine proteases. These enzymes have diverse physiological functions and many kallikrein genes are biomarkers for cancer. The encoded protein has chymotrypsin-like activity and plays a role in the proteolysis of intercellular cohesive structures that precedes desquamation, the shedding of the outermost layer of the epidermis. The encoded protein may play a role in cancer invasion and metastasis, and increased expression of this gene is associated with unfavorable prognosis and progression of several types of cancer. Polymorphisms in this gene may play a role in the development of atopic dermatitis. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, which is one of fifteen kallikrein subfamily members located in a gene cluster on chromosome 19. [provided by RefSeq, May 2011]
    Expression
    Biased expression in skin (RPKM 68.1) and esophagus (RPKM 25.3) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See KLK7 in Genome Data Viewer
    Location:
    19q13.41
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (50976468..50984064, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (54064867..54072534, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (51479724..51487320, complement)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372442 Neighboring gene kallikrein related peptidase 5 Neighboring gene kallikrein related peptidase 6 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:51486908-51487462 Neighboring gene MPRA-validated peak3546 silencer Neighboring gene Sharpr-MPRA regulatory region 5518 Neighboring gene kallikrein related peptidase 8 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:51509835-51510334 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:51512731-51513231 Neighboring gene kallikrein related peptidase 9

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables metalloendopeptidase activity TAS
    Traceable Author Statement
    more info
     
    enables peptidase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables serine-type endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables serine-type peptidase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in epidermis development TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in extracellular matrix disassembly TAS
    Traceable Author Statement
    more info
     
    involved_in positive regulation of antibacterial peptide production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein maturation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cornified envelope IEA
    Inferred from Electronic Annotation
    more info
     
    located_in epidermal lamellar body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region TAS
    Traceable Author Statement
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    is_active_in secretory granule IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    kallikrein-7
    Names
    kallikrein 7 (chymotryptic, stratum corneum)
    serine protease 6
    signal protein
    stratum corneum chymotryptic enzyme
    NP_001193982.1
    NP_001230055.1
    NP_005037.1
    NP_644806.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001207053.2NP_001193982.1  kallikrein-7 isoform 2

      See identical proteins and their annotated locations for NP_001193982.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at a downstream, in-frame start site, compared to variant 1. The encoded isoform (2) has a shorter N-terminus compared to isoform 1.
      Source sequence(s)
      AC011483, AF411214, AF411215, AI049783
      Consensus CDS
      CCDS59414.1
      UniProtKB/Swiss-Prot
      P49862
      Related
      ENSP00000469950.1, ENST00000597707.5
      Conserved Domains (1) summary
      smart00020
      Location:2173
      Tryp_SPc; Trypsin-like serine protease
    2. NM_001243126.1NP_001230055.1  kallikrein-7 isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) uses an alternate upstream start codon compared to variant 1. The 5' CDS is in a different reading frame, but this variant lacks an exon in the coding region which results in a frameshift and in-frame 3' CDS, compared to variant 1. The encoded isoform (3) has a unique N-terminus and is shorter than isoform 1.
      Source sequence(s)
      AC011483, AF411214, AI049783, AK295313
      UniProtKB/Swiss-Prot
      P49862
      UniProtKB/TrEMBL
      B4DHX9
      Conserved Domains (2) summary
      smart00020
      Location:64238
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:64241
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    3. NM_005046.4NP_005037.1  kallikrein-7 isoform 1 preproprotein

      See identical proteins and their annotated locations for NP_005037.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1 and 2 encode the same isoform.
      Source sequence(s)
      AC011483, AF411214, AI049783
      Consensus CDS
      CCDS12812.1
      UniProtKB/Swiss-Prot
      A8K0U5, P49862, Q8N5N9, Q8NFV7
      UniProtKB/TrEMBL
      A0A024R4H6, B8K1J4
      Related
      ENSP00000470538.1, ENST00000595820.6
      Conserved Domains (1) summary
      smart00020
      Location:29245
      Tryp_SPc; Trypsin-like serine protease
    4. NM_139277.2NP_644806.1  kallikrein-7 isoform 1 preproprotein

      See identical proteins and their annotated locations for NP_644806.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same isoform (1).
      Source sequence(s)
      AA101043, AC011483, AF411214, AI049783, AY601109
      Consensus CDS
      CCDS12812.1
      UniProtKB/Swiss-Prot
      A8K0U5, P49862, Q8N5N9, Q8NFV7
      UniProtKB/TrEMBL
      A0A024R4H6, B8K1J4
      Related
      ENSP00000375683.1, ENST00000391807.5
      Conserved Domains (1) summary
      smart00020
      Location:29245
      Tryp_SPc; Trypsin-like serine protease

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

      Range
      50976468..50984064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060943.1 Alternate T2T-CHM13v2.0

      Range
      54064867..54072534 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)