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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001085492.1 → NP_001078961.1 arginine-glutamic acid dipeptide repeats protein
See identical proteins and their annotated locations for NP_001078961.1
Status: VALIDATED
- Source sequence(s)
-
AL606903, AL606982, AL606988, AL691453
- Consensus CDS
-
CCDS38979.1
- UniProtKB/Swiss-Prot
- A2A7T4, Q80TZ9
- UniProtKB/TrEMBL
-
A2A7T3
- Related
- ENSMUSP00000101307.3, ENSMUST00000105682.9
- Conserved Domains (7) summary
-
- smart00717
Location:396 → 441
- SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd00202
Location:506 → 560
- ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1557
- Atrophin-1; Atrophin-1 family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000070.7 Reference GRCm39 C57BL/6J
- Range
-
150365372..150706423
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006539136.5 → XP_006539199.1 arginine-glutamic acid dipeptide repeats protein isoform X1
See identical proteins and their annotated locations for XP_006539199.1
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1568
- Atrophin-1; Atrophin-1 family
-
XM_030253747.2 → XP_030109607.1 arginine-glutamic acid dipeptide repeats protein isoform X5
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1560
- Atrophin-1; Atrophin-1 family
-
XM_030253743.2 → XP_030109603.1 arginine-glutamic acid dipeptide repeats protein isoform X2
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1567
- Atrophin-1; Atrophin-1 family
-
XM_030253748.2 → XP_030109608.1 arginine-glutamic acid dipeptide repeats protein isoform X6
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1559
- Atrophin-1; Atrophin-1 family
-
XM_006539139.4 → XP_006539202.1 arginine-glutamic acid dipeptide repeats protein isoform X3
See identical proteins and their annotated locations for XP_006539202.1
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1566
- Atrophin-1; Atrophin-1 family
-
XM_030253749.2 → XP_030109609.1 arginine-glutamic acid dipeptide repeats protein isoform X7
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1558
- Atrophin-1; Atrophin-1 family
-
XM_030253746.2 → XP_030109606.1 arginine-glutamic acid dipeptide repeats protein isoform X4
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1565
- Atrophin-1; Atrophin-1 family
-
XM_006539143.4 → XP_006539206.1 arginine-glutamic acid dipeptide repeats protein isoform X8
See identical proteins and their annotated locations for XP_006539206.1
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:353 → 398
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:461 → 510
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 265
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:244 → 294
- ELM2; ELM2 domain
- pfam03154
Location:526 → 1526
- Atrophin-1; Atrophin-1 family
-
XM_030253750.2 → XP_030109610.1 arginine-glutamic acid dipeptide repeats protein isoform X9
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:353 → 398
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:461 → 510
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 265
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:244 → 294
- ELM2; ELM2 domain
- pfam03154
Location:526 → 1524
- Atrophin-1; Atrophin-1 family
-
XM_030253741.2 → XP_030109601.1 arginine-glutamic acid dipeptide repeats protein isoform X1
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1568
- Atrophin-1; Atrophin-1 family
-
XM_030253744.2 → XP_030109604.1 arginine-glutamic acid dipeptide repeats protein isoform X3
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1566
- Atrophin-1; Atrophin-1 family
-
XM_006539137.5 → XP_006539200.1 arginine-glutamic acid dipeptide repeats protein isoform X1
See identical proteins and their annotated locations for XP_006539200.1
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1568
- Atrophin-1; Atrophin-1 family
-
XM_030253745.2 → XP_030109605.1 arginine-glutamic acid dipeptide repeats protein isoform X3
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (5) summary
-
- cd11661
Location:395 → 440
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:503 → 552
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- cd04709
Location:102 → 307
- BAH_MTA; BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH ...
- pfam01448
Location:286 → 336
- ELM2; ELM2 domain
- pfam03154
Location:568 → 1566
- Atrophin-1; Atrophin-1 family
-
XM_006539145.5 → XP_006539208.1 arginine-glutamic acid dipeptide repeats protein isoform X13
See identical proteins and their annotated locations for XP_006539208.1
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (3) summary
-
- cd11661
Location:77 → 122
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:185 → 234
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- pfam03154
Location:250 → 1250
- Atrophin-1; Atrophin-1 family
-
XM_006539144.4 → XP_006539207.1 arginine-glutamic acid dipeptide repeats protein isoform X10
See identical proteins and their annotated locations for XP_006539207.1
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (4) summary
-
- cd11661
Location:127 → 172
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:235 → 284
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- pfam01448
Location:18 → 68
- ELM2; ELM2 domain
- pfam03154
Location:300 → 1300
- Atrophin-1; Atrophin-1 family
-
XM_030253751.2 → XP_030109611.1 arginine-glutamic acid dipeptide repeats protein isoform X11
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (4) summary
-
- cd11661
Location:127 → 172
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:235 → 284
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- pfam01448
Location:18 → 68
- ELM2; ELM2 domain
- pfam03154
Location:300 → 1298
- Atrophin-1; Atrophin-1 family
-
XM_030253752.2 → XP_030109612.1 arginine-glutamic acid dipeptide repeats protein isoform X12
- UniProtKB/TrEMBL
-
A2A7T3
- Related
- ENSMUSP00000101305.3, ENSMUST00000105680.9
- Conserved Domains (4) summary
-
- cd11661
Location:127 → 172
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:235 → 284
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- pfam01448
Location:18 → 68
- ELM2; ELM2 domain
- pfam03154
Location:300 → 1297
- Atrophin-1; Atrophin-1 family
-
XM_036164397.1 → XP_036020290.1 arginine-glutamic acid dipeptide repeats protein isoform X14
- UniProtKB/TrEMBL
-
A2A7T3
- Conserved Domains (3) summary
-
- cd11661
Location:7 → 45
- SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
- smart00401
Location:108 → 157
- ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
- pfam03154
Location:173 → 1173
- Atrophin-1; Atrophin-1 family
-
XM_030253753.1 → XP_030109613.1 arginine-glutamic acid dipeptide repeats protein isoform X16
- Conserved Domains (1) summary
-
- pfam03154
Location:14 → 1012
- Atrophin-1; Atrophin-1 family
-
XM_030253754.1 → XP_030109614.1 arginine-glutamic acid dipeptide repeats protein isoform X17
- Conserved Domains (1) summary
-
- pfam03154
Location:14 → 1011
- Atrophin-1; Atrophin-1 family
-
XM_006539147.5 → XP_006539210.1 arginine-glutamic acid dipeptide repeats protein isoform X15
See identical proteins and their annotated locations for XP_006539210.1
- Conserved Domains (1) summary
-
- pfam03154
Location:14 → 1014
- Atrophin-1; Atrophin-1 family