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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163467.1 → NP_001156939.1 protein PHTF1 isoform a
See identical proteins and their annotated locations for NP_001156939.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same isoform (a).
- Source sequence(s)
-
AC162922, AK019146, BE948000, BU053202, CO041244
- Consensus CDS
-
CCDS17698.1
- UniProtKB/Swiss-Prot
- Q9CS51, Q9CSB9, Q9QZ09, Q9QZ14
- UniProtKB/TrEMBL
-
Q5IBN5
- Related
- ENSMUSP00000113973.2, ENSMUST00000117150.8
- Conserved Domains (1) summary
-
- pfam12129
Location:5 → 149
- Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor
-
NM_001163468.1 → NP_001156940.1 protein PHTF1 isoform b
See identical proteins and their annotated locations for NP_001156940.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame coding exon compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AC162922, AK019146, BE948000, BU053202, CO041244
- Consensus CDS
-
CCDS51030.1
- UniProtKB/TrEMBL
-
Q8C2F6
- Related
- ENSMUSP00000058137.9, ENSMUST00000055425.15
- Conserved Domains (1) summary
-
- pfam12129
Location:5 → 96
- Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor
-
NM_001163469.1 → NP_001156941.1 protein PHTF1 isoform c
See identical proteins and their annotated locations for NP_001156941.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame coding exon compared to variant 1. The resulting isoform (c) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AC162922, AK019146, BE948000, BU053202, CO041244
- Consensus CDS
-
CCDS51029.1
- UniProtKB/TrEMBL
-
Q80YS3
- Related
- ENSMUSP00000088184.5, ENSMUST00000090685.11
- Conserved Domains (1) summary
-
- pfam12129
Location:5 → 149
- Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor
-
NM_013629.2 → NP_038657.2 protein PHTF1 isoform a
See identical proteins and their annotated locations for NP_038657.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a). Variants 1 and 2 both encode the same isoform.
- Source sequence(s)
-
AC162922, AK019146, BE948000, BU053202, CO041244
- Consensus CDS
-
CCDS17698.1
- UniProtKB/Swiss-Prot
- Q9CS51, Q9CSB9, Q9QZ09, Q9QZ14
- UniProtKB/TrEMBL
-
Q5IBN5
- Related
- ENSMUSP00000066607.8, ENSMUST00000063717.14
- Conserved Domains (1) summary
-
- pfam12129
Location:5 → 149
- Phtf-FEM1B_bdg; Male germ-cell putative homeodomain transcription factor