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    ADGRL3-AS1 ADGRL3 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101927186, updated on 17-Sep-2024

    Summary

    Official Symbol
    ADGRL3-AS1provided by HGNC
    Official Full Name
    ADGRL3 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:50604
    See related
    AllianceGenome:HGNC:50604
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LPHN3-AS1
    Expression
    Broad expression in brain (RPKM 22.6), adrenal (RPKM 16.9) and 17 other tissues See more
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    Genomic context

    See ADGRL3-AS1 in Genome Data Viewer
    Location:
    4q13.1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (62071755..62161765, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (65509063..65599059, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (62937473..63027483, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900173 Neighboring gene ribosomal protein L17 pseudogene 19 Neighboring gene adhesion G protein-coupled receptor L3 Neighboring gene Sharpr-MPRA regulatory region 909 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:62252700-62253638 Neighboring gene Sharpr-MPRA regulatory region 11493 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:62459979-62460480 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62512092-62512706 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62512707-62513321 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:62629970-62630560 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:62630561-62631150 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62634781-62635644 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62635645-62636506 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:62633919-62634780 Neighboring gene ribosomal protein S12 pseudogene 9 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:62776506-62777086 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:62777087-62777665 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:62857945-62858479 Neighboring gene uncharacterized LOC101927145 Neighboring gene ribosomal protein S15a pseudogene 17 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:63071027-63071527 Neighboring gene ubiquitin conjugating enzyme E2 L3 pseudogene Neighboring gene ribosomal protein L21 pseudogene 47

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Other Names

    • LPHN3 antisense RNA 1
    • adhesion G protein-coupled receptor L3 antisense RNA 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110595.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC007511, DB518756

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      62071755..62161765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      65509063..65599059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)