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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001202509.2 → NP_001189438.1 CKLF-CMTM1 protein isoform 3
See identical proteins and their annotated locations for NP_001189438.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon in the coding region, compared to variant 1. The encoded isoform (3) is shorter, compared to isoform 1.
- Source sequence(s)
-
AC010542, BM929895
- UniProtKB/TrEMBL
-
E9PSG2
- Related
- ENSP00000433998.1, ENST00000527729.5
-
NM_001204098.2 → NP_001191027.1 CKLF-CMTM1 protein isoform 2
See identical proteins and their annotated locations for NP_001191027.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has multiple differences in the coding region, compared to variant 1, one of which results in a translational frameshift. The resulting protein (isoform 2) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC010542, FY211334
- UniProtKB/TrEMBL
-
A0A087X286
- Related
- ENSP00000484781.1, ENST00000615332.5
-
NM_001204099.2 → NP_001191028.1 CKLF-CMTM1 protein isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC010542, FY212695
- UniProtKB/TrEMBL
-
A0A087WVB3
- Related
- ENSP00000479319.1, ENST00000616804.5
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000016.10 Reference GRCh38.p14 Primary Assembly
- Range
-
66552576..66579135
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060940.1 Alternate T2T-CHM13v2.0
- Range
-
72346871..72373430
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)