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    Mnd1 meiotic nuclear divisions 1 [ Mus musculus (house mouse) ]

    Gene ID: 76915, updated on 2-Nov-2024

    Summary

    Official Symbol
    Mnd1provided by MGI
    Official Full Name
    meiotic nuclear divisions 1provided by MGI
    Primary source
    MGI:MGI:1924165
    See related
    Ensembl:ENSMUSG00000033752 AllianceGenome:MGI:1924165
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gaj; 2610034E18Rik
    Summary
    Predicted to enable double-stranded DNA binding activity. Predicted to be involved in homologous chromosome pairing at meiosis and reciprocal meiotic recombination. Predicted to be located in nucleus. Is expressed in branchial arch; central nervous system; embryo; forelimb bud; and somite. Orthologous to human MND1 (meiotic nuclear divisions 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in liver E14 (RPKM 3.5), CNS E11.5 (RPKM 3.0) and 17 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mnd1 in Genome Data Viewer
    Location:
    3 F1; 3 37.46 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (83995240..84063084, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (84087933..84155798, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4548 Neighboring gene predicted gene, 30352 Neighboring gene STARR-positive B cell enhancer ABC_E3440 Neighboring gene predicted gene, 30458 Neighboring gene STARR-positive B cell enhancer ABC_E7917 Neighboring gene STARR-positive B cell enhancer ABC_E9214 Neighboring gene STARR-positive B cell enhancer ABC_E1020 Neighboring gene STARR-seq mESC enhancer starr_08077 Neighboring gene tripartite motif-containing 2 Neighboring gene STARR-seq mESC enhancer starr_08078 Neighboring gene ribosomal protein L36a pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr3:84032505-84032806 Neighboring gene nuclear encoded tRNA glycine 9 (anticodon GCC) Neighboring gene predicted gene, 40078

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Gene trapped (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in homologous chromosome pairing at meiosis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in homologous chromosome pairing at meiosis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in reciprocal meiotic recombination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in reciprocal meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in reciprocal meiotic recombination ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    meiotic nuclear division protein 1 homolog
    Names
    meiotic nuclear divisions 1 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001398662.1NP_001385591.1  meiotic nuclear division protein 1 homolog isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC154875
      Conserved Domains (1) summary
      COG5124
      Location:5179
      COG5124; Protein predicted to be involved in meiotic recombination [Cell division and chromosome partitioning / General function prediction only]
    2. NM_029797.4NP_084073.2  meiotic nuclear division protein 1 homolog isoform 1

      See identical proteins and their annotated locations for NP_084073.2

      Status: VALIDATED

      Source sequence(s)
      AC154875
      Consensus CDS
      CCDS38464.1
      UniProtKB/Swiss-Prot
      Q8K396, Q9D0A1
      Related
      ENSMUSP00000048262.7, ENSMUST00000047368.8
      Conserved Domains (2) summary
      COG5124
      Location:5204
      COG5124; Protein predicted to be involved in meiotic recombination [Cell division and chromosome partitioning / General function prediction only]
      pfam03962
      Location:16202
      Mnd1; Mnd1 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      83995240..84063084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036163403.1XP_036019296.1  meiotic nuclear division protein 1 homolog isoform X1

      Conserved Domains (1) summary
      COG5124
      Location:1189
      COG5124; Protein predicted to be involved in meiotic recombination [Cell division and chromosome partitioning / General function prediction only]