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    prtn3l.2 proteinase 3 like gene 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 496767, updated on 17-Aug-2024

    Summary

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    Official Symbol
    prtn3l.2provided by Xenbase
    Official Full Name
    proteinase 3 like gene 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5764783
    See related
    Ensembl:ENSXETG00000038551
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    prtn3; prtn3-like.2
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    Genomic context

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    See prtn3l.2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (105876521..105880832, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (86798150..86802468, complement)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene ring finger protein 126 Neighboring gene follistatin like 3 Neighboring gene growth differentiation factor 15 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    complement factor D

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      105876521..105880832 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002940662.3 → XP_002940708.1  complement factor D

      UniProtKB/TrEMBL
      A0A6I8QNS2, Q5M8G2
      Related
      ENSXETP00000070937.2, ENSXETT00000081945.2
      Conserved Domains (2) summary
      smart00020
      Location:81 → 305
      Tryp_SPc; Trypsin-like serine protease
      cd00190
      Location:82 → 308
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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