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    adap1l.2 ArfGAP with dual PH domains 1 like gene 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100145554, updated on 17-Aug-2024

    Summary

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    Official Symbol
    adap1l.2provided by Xenbase
    Official Full Name
    ArfGAP with dual PH domains 1 like gene 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5887027
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    XB5887026
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See adap1l.2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (122661725..122662713, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (112253457..112254445, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene ArfGAP with dual PH domains 1 like Neighboring gene urotensin-2 receptor-like 2 Neighboring gene lectin, galactoside-binding, soluble, 1, gene 1 Neighboring gene lectin, galactoside-binding, soluble, 1, gene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC100145554

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126985.1 → NP_001120457.1  uncharacterized protein LOC100145554

      See identical proteins and their annotated locations for NP_001120457.1

      Status: PREDICTED

      Source sequence(s)
      BC161242
      UniProtKB/TrEMBL
      B1H345, F6VN37
      Conserved Domains (2) summary
      smart00178
      Location:5 → 174
      SAR; Sar1p-like members of the Ras-family of small GTPases
      cd00878
      Location:21 → 174
      Arf_Arl; ADP-ribosylation factor(Arf)/Arf-like (Arl) small GTPases

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      122661725..122662713 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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