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    LOC542515 rolled leaf 1 [ Zea mays ]

    Gene ID: 542515, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC542515
    Gene description
    rolled leaf 1
    Locus tag
    ZEAMMB73_Zm00001d048527
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    rld1; HB133; GRMZM2G109987
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    Genomic context

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    See LOC542515 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 9 NC_050104.1 (161042370..161050177, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 9 NC_024467.2 (157816088..157823895, complement)

    Chromosome 9 - NC_050104.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100216851 Neighboring gene transcription factor BTF3 Neighboring gene developmentally-regulated GTP-binding protein 2 Neighboring gene transfer RNA asparagine (anticodon GUU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rolled leaf 1
    Names
    CL4357_1
    CL4357_1e
    HB transcription factor
    Homeobox-leucine zipper protein REVOLUTA
    Rld*-1441
    Rld*-1990
    Rld1-N1990

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001309221.1 → NP_001296150.1  rolled leaf 1

      See identical proteins and their annotated locations for NP_001296150.1

      Status: PROVISIONAL

      Source sequence(s)
      BT066287
      UniProtKB/TrEMBL
      A0A804RBF3, C0PDB8
      Conserved Domains (4) summary
      cd08875
      Location:162 → 378
      START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
      smart00338
      Location:82 → 134
      BRLZ; basic region leucin zipper
      pfam00046
      Location:30 → 87
      Homeobox; Homeobox domain
      pfam08670
      Location:698 → 837
      MEKHLA; MEKHLA domain

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050104.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      161042370..161050177 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001112063.1: Suppressed sequence

      Description
      NM_001112063.1: This RefSeq was suppressed because there are sequence differences with the genome.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials