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    LOC103651515 zinc finger CCCH domain-containing protein 7 [ Zea mays ]

    Gene ID: 103651515, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC103651515
    Gene description
    zinc finger CCCH domain-containing protein 7
    Locus tag
    ZEAMMB73_Zm00001d044260
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G306357
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    Genomic context

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    See LOC103651515 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 3 NC_050098.1 (225033684..225047088)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 3 NC_024461.2 (223156502..223169725)

    Chromosome 3 - NC_050098.1Genomic Context describing neighboring genes Neighboring gene LIN1 protein Neighboring gene uncharacterized LOC100277492 Neighboring gene uncharacterized LOC109945347 Neighboring gene Protein indeterminate-domain 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GRASSIUS: a platform for comparative regulatory genomics across the grasses. Yilmaz A, et al. Plant Physiol, 2009 Jan. PMID 18987217, Free PMC Article
    2. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger CCCH domain-containing protein 7
    Names
    C3H-type transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050098.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      225033684..225047088
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035966495.1 → XP_035822388.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    2. XM_035966496.1 → XP_035822389.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    3. XM_035966499.1 → XP_035822392.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    4. XM_035966497.1 → XP_035822390.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    5. XM_035966501.1 → XP_035822394.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    6. XM_035966500.1 → XP_035822393.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    7. XM_035966498.1 → XP_035822391.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    8. XM_035966502.1 → XP_035822395.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    9. XM_035966503.1 → XP_035822396.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    10. XM_035966492.1 → XP_035822385.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    11. XM_035966493.1 → XP_035822386.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

    12. XM_035966494.1 → XP_035822387.1  zinc finger CCCH domain-containing protein 7

      UniProtKB/TrEMBL
      A0A096T535, K4JED0
      Conserved Domains (1) summary
      COG5084
      Location:435 → 514
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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