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    LOC18586721 serine/threonine-protein kinase CTR1 [ Theobroma cacao (cacao) ]

    Gene ID: 18586721, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18586721
    Gene description
    serine/threonine-protein kinase CTR1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC18586721 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 10 NC_030859.1 (9832819..9847933, complement)

    Chromosome 10 - NC_030859.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA-binding domain-containing protein 5 Neighboring gene uncharacterized LOC108663611 Neighboring gene uncharacterized LOC108663683 Neighboring gene cytochrome P450 83B1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030859.1 Chromosome 10 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase CTR1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030859.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      9832819..9847933 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018128945.1 → XP_017984434.1  serine/threonine-protein kinase CTR1 isoform X1

      UniProtKB/TrEMBL
      A0A061FQC7

    2. XM_018128944.1 → XP_017984433.1  serine/threonine-protein kinase CTR1 isoform X1

      UniProtKB/TrEMBL
      A0A061FQC7

    3. XM_007010238.2 → XP_007010300.2  serine/threonine-protein kinase CTR1 isoform X2

      UniProtKB/TrEMBL
      A0A061FP67

    4. XM_018128943.1 → XP_017984432.1  serine/threonine-protein kinase CTR1 isoform X1

      UniProtKB/TrEMBL
      A0A061FQC7

    5. XM_018128946.1 → XP_017984435.1  serine/threonine-protein kinase CTR1 isoform X3

      UniProtKB/TrEMBL
      A0A061FPX0
    Nucleotide Protein
    Heading Accession and Version

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