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    LOC18588002 histidine-containing phosphotransfer protein 4 [ Theobroma cacao (cacao) ]

    Gene ID: 18588002, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18588002
    Gene description
    histidine-containing phosphotransfer protein 4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 9 NC_030858.1 (2413470..2418349)

    Chromosome 9 - NC_030858.1Genomic Context describing neighboring genes Neighboring gene protein cereblon Neighboring gene tryptophan--tRNA ligase, chloroplastic/mitochondrial Neighboring gene auxin-responsive protein IAA2 Neighboring gene mitochondrial import inner membrane translocase subunit TIM17-2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030858.1 Chromosome 9 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histidine phosphotransfer kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein histidine kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytokinin-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphorelay signal transduction system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histidine-containing phosphotransfer protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030858.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      2413470..2418349
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007012112.2 → XP_007012174.1  histidine-containing phosphotransfer protein 4

      See identical proteins and their annotated locations for XP_007012174.1

      UniProtKB/TrEMBL
      A0A061GKV8
      Conserved Domains (1) summary
      pfam01627
      Location:44 → 128
      Hpt; Hpt domain

    2. XM_018128054.1 → XP_017983543.1  histidine-containing phosphotransfer protein 4

      UniProtKB/TrEMBL
      A0A061GKV8
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases