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    LOC18612073 shaggy-related protein kinase zeta [ Theobroma cacao (cacao) ]

    Gene ID: 18612073, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18612073
    Gene description
    shaggy-related protein kinase zeta
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC18612073 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 1 NC_030850.1 (9068818..9074450)

    Chromosome 1 - NC_030850.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase CDL1 Neighboring gene peroxidase P7 Neighboring gene aspartate aminotransferase, mitochondrial Neighboring gene putative pentatricopeptide repeat-containing protein At4g17915

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030850.1 Chromosome 1 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    shaggy-related protein kinase eta; shaggy-related protein kinase zeta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030850.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      9068818..9074450
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007048663.2 → XP_007048725.1  shaggy-related protein kinase eta isoform X1

      See identical proteins and their annotated locations for XP_007048725.1

      UniProtKB/TrEMBL
      A0A061DKD2, A0A061DSC5
      Conserved Domains (2) summary
      smart00220
      Location:69 → 353
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14137
      Location:64 → 356
      STKc_GSK3; The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3

    2. XM_018126831.1 → XP_017982320.1  shaggy-related protein kinase zeta isoform X2

      UniProtKB/TrEMBL
      A0A061GLI4
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases