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    LOC18593376 heterogeneous nuclear ribonucleoprotein 1 [ Theobroma cacao (cacao) ]

    Gene ID: 18593376, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18593376
    Gene description
    heterogeneous nuclear ribonucleoprotein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC18593376 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 7 NC_030856.1 (1274474..1278373)

    Chromosome 7 - NC_030856.1Genomic Context describing neighboring genes Neighboring gene probable serine/threonine-protein kinase WNK11 Neighboring gene probably inactive leucine-rich repeat receptor-like protein kinase IMK2 Neighboring gene protein TORNADO 1 Neighboring gene uncharacterized LOC18593378

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030856.1 Chromosome 7 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030856.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      1274474..1278373
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018124573.1 → XP_017980062.1  heterogeneous nuclear ribonucleoprotein 1 isoform X3

      UniProtKB/TrEMBL
      A0A061F683

    2. XM_018124572.1 → XP_017980061.1  heterogeneous nuclear ribonucleoprotein 1 isoform X2

      UniProtKB/TrEMBL
      A0A061F4D4

    3. XM_018124571.1 → XP_017980060.1  heterogeneous nuclear ribonucleoprotein 1 isoform X1

      UniProtKB/TrEMBL
      A0A061F4D4
    Nucleotide Protein
    Heading Accession and Version

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