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    LOC18603419 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic [ Theobroma cacao (cacao) ]

    Gene ID: 18603419, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18603419
    Gene description
    bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 4 NC_030853.1 (30103508..30109312, complement)

    Chromosome 4 - NC_030853.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18603417 Neighboring gene pentatricopeptide repeat-containing protein At2g36980, mitochondrial Neighboring gene chromatin structure-remodeling complex protein SYD Neighboring gene xyloglucan endotransglucosylase/hydrolase protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030853.1 Chromosome 4 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-dehydroquinate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables shikimate 3-dehydrogenase (NADP+) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chorismate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in shikimate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030853.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      30103508..30109312 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007035387.2 → XP_007035449.2  bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic

      UniProtKB/TrEMBL
      A0A061EMV1
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases