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    LOC18585913 auxin transporter-like protein 2 [ Theobroma cacao (cacao) ]

    Gene ID: 18585913, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18585913
    Gene description
    auxin transporter-like protein 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    See LOC18585913 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 10 NC_030859.1 (1179941..1184625, complement)

    Chromosome 10 - NC_030859.1Genomic Context describing neighboring genes Neighboring gene probable zinc metalloprotease EGY2, chloroplastic Neighboring gene uncharacterized LOC18585912 Neighboring gene syntaxin-31 Neighboring gene 60S acidic ribosomal protein P0

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030859.1 Chromosome 10 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    auxin transporter-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030859.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      1179941..1184625 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007008986.2 → XP_007009048.1  auxin transporter-like protein 2

      See identical proteins and their annotated locations for XP_007009048.1

      UniProtKB/TrEMBL
      A0A061FME1
      Conserved Domains (1) summary
      PLN03074
      Location:1 → 469
      PLN03074; auxin influx permease; Provisional

    2. XM_007008985.2 → XP_007009047.1  auxin transporter-like protein 2

      See identical proteins and their annotated locations for XP_007009047.1

      UniProtKB/TrEMBL
      A0A061FME1
      Conserved Domains (1) summary
      PLN03074
      Location:1 → 469
      PLN03074; auxin influx permease; Provisional
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases