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    LOC18588551 protein CASEIN KINASE I-LIKE 3 [ Theobroma cacao (cacao) ]

    Gene ID: 18588551, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18588551
    Gene description
    protein CASEIN KINASE I-LIKE 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theobroma cacao
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 9 NC_030858.1 (5503771..5510084, complement)

    Chromosome 9 - NC_030858.1Genomic Context describing neighboring genes Neighboring gene probable lactoylglutathione lyase, chloroplastic Neighboring gene probable RNA methyltransferase At5g51130 Neighboring gene pre-mRNA-splicing factor SLU7 Neighboring gene transmembrane protein 234 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030858.1 Chromosome 9 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein CASEIN KINASE I-LIKE 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Criollo_cocoa_genome_V2 Primary Assembly

    Genomic

    1. NC_030858.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

      Range
      5503771..5510084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007013033.2 → XP_007013095.1  protein CASEIN KINASE I-LIKE 3 isoform X2

      See identical proteins and their annotated locations for XP_007013095.1

      UniProtKB/TrEMBL
      A0A061GUD3
      Conserved Domains (2) summary
      COG0515
      Location:8 → 315
      SPS1; Serine/threonine protein kinase [Signal transduction mechanisms]
      cd14125
      Location:8 → 282
      STKc_CK1_delta_epsilon; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 delta and epsilon

    2. XM_007013032.2 → XP_007013094.1  protein CASEIN KINASE I-LIKE 3 isoform X1

      See identical proteins and their annotated locations for XP_007013094.1

      UniProtKB/TrEMBL
      A0A061GMV7
      Conserved Domains (2) summary
      COG0515
      Location:8 → 383
      SPS1; Serine/threonine protein kinase [Signal transduction mechanisms]
      cd14125
      Location:8 → 282
      STKc_CK1_delta_epsilon; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 delta and epsilon
    Nucleotide Protein
    Heading Accession and Version

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