U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Trav7-5 T cell receptor alpha variable 7-5 [ Mus musculus (house mouse) ]

Gene ID: 630061, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
Trav7-5provided by MGI
Official Full Name
T cell receptor alpha variable 7-5provided by MGI
Primary source
MGI:MGI:3648929
See related
Ensembl:ENSMUSG00000106620 IMGT/GENE-DB:TRAV7-5; AllianceGenome:MGI:3648929
Gene type
other
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm7024; EG630061
Summary
Predicted to enable peptide antigen binding activity. Orthologous to human TRAV12-1 (T cell receptor alpha variable 12-1); TRAV12-2 (T cell receptor alpha variable 12-2); and TRAV12-3 (T cell receptor alpha variable 12-3). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Trav7-5 in Genome Data Viewer
Location:
14 C2; 14 27.41 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (53768243..53768770)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (53530786..53531313)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene T cell receptor alpha chain Neighboring gene T cell receptor alpha variable 12-1 Neighboring gene T cell receptor alpha variable 6-6 Neighboring gene T cell receptor alpha variable 13-1 Neighboring gene T cell receptor alpha variable 11

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Antigen presentation by keratinocytes directs autoimmune skin disease. Fan L, et al. Proc Natl Acad Sci U S A, 2003 Mar 18. PMID 12629221, Free PMC Article
  2. IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Giudicelli V, et al. Nucleic Acids Res, 2005 Jan 1. PMID 15608191, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Clone Names

  • MGC73885

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables peptide antigen binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007044.1 

    Range
    1103320..1103847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    53768243..53768770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039237.1: Suppressed sequence

    Description
    NM_001039237.1: This RefSeq was permanently suppressed because this locus is part of the T-cell alpha receptor complex and RefSeq mRNAs are not in scope for loci that undergo somatic rearrangement.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.