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Trav4-1 T cell receptor alpha variable 4-1 [ Mus musculus (house mouse) ]

Gene ID: 100042384, updated on 17-Aug-2024

Summary

Official Symbol
Trav4-1provided by MGI
Official Full Name
T cell receptor alpha variable 4-1provided by MGI
Primary source
MGI:MGI:3781986
See related
Ensembl:ENSMUSG00000106382 IMGT/GENE-DB:TRAV4-1; AllianceGenome:MGI:3781986
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm3814; Trav4-1p
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Genomic context

See Trav4-1 in Genome Data Viewer
Location:
14 C2; 14 27.01 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (52844764..52845261)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (52607307..52607804)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_36708 Neighboring gene T cell receptor alpha chain Neighboring gene T cell receptor alpha variable 3-1 Neighboring gene T cell receptor alpha variable 2 Neighboring gene T cell receptor alpha variable 5-1 Neighboring gene T cell receptor alpha variable 6-1

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007044.1 

    Range
    179841..180338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    52844764..52845261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)