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    SYPL1P1 synaptophysin like 1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100130011, updated on 17-Sep-2024

    Summary

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    Official Symbol
    SYPL1P1provided by HGNC
    Official Full Name
    synaptophysin like 1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:53546
    See related
    Ensembl:ENSG00000243154 AllianceGenome:HGNC:53546
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See SYPL1P1 in Genome Data Viewer
    Location:
    3q25.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (154651673..154652375, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (157425630..157426332, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (154369462..154370164, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene G protein-coupled receptor 149 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_65446 Neighboring gene DEAD-box helicase 50 pseudogene 2 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_65451 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_65484 Neighboring gene dynein light chain LC8-type 1 pseudogene 5 Neighboring gene ribosomal protein L9 pseudogene 15

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022224.1 

      Range
      101..803
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      154651673..154652375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      157425630..157426332 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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