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    LOC7472442 LOB domain-containing protein 21 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7472442, updated on 7-Apr-2023

    Summary

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    Gene symbol
    LOC7472442
    Gene description
    LOB domain-containing protein 21
    Locus tag
    POPTR_008G071500v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC7472442 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 8 NC_037292.2 (4392866..4393502, complement)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 8 NC_037292.1 (4408822..4409552, complement)

    Chromosome 8 - NC_037292.2Genomic Context describing neighboring genes Neighboring gene alcohol acyltransferase 9 Neighboring gene trihelix transcription factor ENAP2 Neighboring gene U-box domain-containing protein 1 Neighboring gene uncharacterized LOC7472443

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. Ralph SG, et al. BMC Genomics, 2008 Jan 29. PMID 18230180, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LOB domain-containing protein 21

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037292.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      4392866..4393502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002312135.4 → XP_002312171.2  LOB domain-containing protein 21

      See identical proteins and their annotated locations for XP_002312171.2

      UniProtKB/TrEMBL
      A9P9I7, B9HHT6
      Conserved Domains (1) summary
      pfam03195
      Location:11 → 103
      DUF260; Protein of unknown function DUF260
    Nucleotide Protein
    Heading Accession and Version

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