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    LOC18104913 B3 domain-containing protein At5g42700 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 18104913, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC18104913
    Gene description
    B3 domain-containing protein At5g42700
    Locus tag
    POPTR_014G031600v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC18104913 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 14 NC_037298.2 (1966641..1975171, complement)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 14 NC_037298.1 (2638227..2640565, complement)

    Chromosome 14 - NC_037298.2Genomic Context describing neighboring genes Neighboring gene BRI1 kinase inhibitor 1 Neighboring gene probable protein phosphatase 2C 12 Neighboring gene uncharacterized LOC18104914 Neighboring gene uncharacterized LOC18104915 Neighboring gene uncharacterized LOC18104917

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    B3 domain-containing protein At5g42700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037298.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      1966641..1975171 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_052446974.1 → XP_052302934.1  B3 domain-containing protein At5g42700 isoform X5

      UniProtKB/TrEMBL
      A0A2K1XPS3

    2. XM_052446975.1 → XP_052302935.1  B3 domain-containing protein At5g42700 isoform X4

      UniProtKB/TrEMBL
      A0A2K1XPS3

    3. XM_052446972.1 → XP_052302932.1  B3 domain-containing protein At5g42700 isoform X2

    4. XM_006374898.3 → XP_006374960.1  B3 domain-containing protein At5g42700 isoform X3

      See identical proteins and their annotated locations for XP_006374960.1

      UniProtKB/TrEMBL
      A0A3N7FXF9, U5FTX0

    5. XM_052446971.1 → XP_052302931.1  B3 domain-containing protein At5g42700 isoform X1

    6. XM_024585422.2 → XP_024441190.1  B3 domain-containing protein At5g42700 isoform X4

      UniProtKB/TrEMBL
      A0A2K1XPS3, A0A3N7FXF9
      Conserved Domains (1) summary
      cd10017
      Location:125 → 216
      B3_DNA; Plant-specific B3-DNA binding domain
    Nucleotide Protein
    Heading Accession and Version

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