U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC4346644 NAC domain-containing protein 48-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4346644, updated on 17-Jul-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC4346644
    Gene description
    NAC domain-containing protein 48-like
    Locus tag
    OSNPB_090295000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC4346644 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (11408271..11410076, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (7077220..7078914, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene putative ubiquitin-conjugating enzyme E2 38 Neighboring gene ankyrin repeat-containing protein At5g02620 Neighboring gene uncharacterized LOC107278800 Neighboring gene uncharacterized LOC112936337 Neighboring gene uncharacterized LOC136351681

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    NAC domain-containing protein 48-like
    Names
    OSJNBa0044K01.19
    Os09g0295000
    OsNAC protein-like
    PH domain leucine-rich repeat protein phosphatase 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      11408271..11410076 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756038.3 → XP_015611524.1  NAC domain-containing protein 48-like

      UniProtKB/TrEMBL
      A0A0P0XJL7, A2YZI2, Q69LG1
      Conserved Domains (1) summary
      pfam02365
      Location:17 → 152
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials