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    Cert1 ceramide transporter 1 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100689038, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Cert1
    Gene description
    ceramide transporter 1
    Locus tag
    I79_015811
    See related
    Ensembl:ENSCGRG00015009810
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Also known as
    Cert; Col4a3bp
    Orthologs
    human mouse all
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    Genomic context

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    See Cert1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614466.1 (583779..682962, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (315224335..315319927)

    NW_003614466.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 31 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase Neighboring gene DNA polymerase kappa

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular machinery for non-vesicular trafficking of ceramide. Hanada K, et al. Nature, 2003 Dec 18. PMID 14685229
    2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-4-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ER to Golgi ceramide transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ceramide transfer protein
    Names
    Ceramide transfer protein
    Collagen type IV alpha-3-binding protein
    collagen type IV alpha 3 binding protein
    collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
    lipid-transfer protein CERT
    NP_001230955.1
    XP_007646800.1
    XP_035315401.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001244026.1 → NP_001230955.1  ceramide transfer protein

      See identical proteins and their annotated locations for NP_001230955.1

      Status: PROVISIONAL

      Source sequence(s)
      AY323814
      UniProtKB/TrEMBL
      Q6VVX1
      Related
      ENSCGRP00015012956.1, ENSCGRT00015015853.2
      Conserved Domains (2) summary
      cd08872
      Location:391 → 624
      START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
      cd13283
      Location:26 → 125
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain

    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614466.1 Reference CriGri_1.0 Primary Assembly

      Range
      583779..682962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035459510.1 → XP_035315401.1  ceramide transfer protein isoform X2

      Conserved Domains (2) summary
      cd13283
      Location:26 → 125
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain
      cl14643
      Location:364 → 557
      SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily

    2. XM_007648610.2 → XP_007646800.1  ceramide transfer protein isoform X1

      See identical proteins and their annotated locations for XP_007646800.1

      UniProtKB/Swiss-Prot
      Q6VVX2
      Conserved Domains (2) summary
      cd08872
      Location:364 → 598
      START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
      cd13283
      Location:26 → 125
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048595.1 Alternate CriGri-PICRH-1.0

      Range
      315224335..315319927
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6VVX2.1 GenPept UniProtKB/Swiss-Prot:Q6VVX2

    Gene LinkOut

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