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    LOC25490520 putative protein FAR1-RELATED SEQUENCE 10 [ Medicago truncatula (barrel medic) ]

    Gene ID: 25490520, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC25490520
    Gene description
    putative protein FAR1-RELATED SEQUENCE 10
    Locus tag
    MtrunA17_Chr6g0473411
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC25490520 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 6 NC_053047.1 (26267035..26272916)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 3 NC_016409.2 (16354908..16366790)

    Chromosome 6 - NC_053047.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120576069 Neighboring gene pentatricopeptide repeat-containing protein At1g12620 Neighboring gene uncharacterized LOC112418163 Neighboring gene uncharacterized LOC112417995

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative protein FAR1-RELATED SEQUENCE 10; uncharacterized protein LOC25490520
    Names
    FAR1 DNA-binding domain protein
    putative transcription factor FAR family
    putative transcription factor interactor and regulator CCHC(Zn) family

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053047.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      26267035..26272916
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024779921.2 → XP_024635689.1  uncharacterized protein LOC25490520 isoform X1

      UniProtKB/TrEMBL
      B7FK60
      Conserved Domains (1) summary
      cd00303
      Location:85 → 139
      retropepsin_like; Retropepsins; pepsin-like aspartate proteases

    2. XM_024779920.2 → XP_024635688.1  uncharacterized protein LOC25490520 isoform X1

      UniProtKB/TrEMBL
      B7FK60
      Conserved Domains (1) summary
      cd00303
      Location:85 → 139
      retropepsin_like; Retropepsins; pepsin-like aspartate proteases

    3. XM_024779923.2 → XP_024635691.1  putative protein FAR1-RELATED SEQUENCE 10 isoform X2

      UniProtKB/TrEMBL
      A0A072V5Y8, A0A396HGX1
      Conserved Domains (1) summary
      cl28060
      Location:70 → 130
      FAR1; FAR1 DNA-binding domain

    RNA

    1. XR_005642056.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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