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    LOC103431576 dof zinc finger protein DOF2.4-like [ Malus domestica (apple) ]

    Gene ID: 103431576, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC103431576
    Gene description
    dof zinc finger protein DOF2.4-like
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Malus domestica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
    Also known as
    DOF5
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    Genomic context

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    See LOC103431576 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current ASM211411v1 (GCF_002114115.1) 15 NC_041803.1 (24245757..24247355)
    101 previous assembly MalDomGD1.0 (GCF_000148765.1) 15 Unlocalized Scaffold (alt_haplotype3.MalDomGD1.0) NW_007546218.1 (151865..153577, complement)

    Chromosome 15 - NC_041803.1Genomic Context describing neighboring genes Neighboring gene autophagy-related protein 101-like Neighboring gene uncharacterized LOC114821346 Neighboring gene L-ascorbate oxidase homolog Neighboring gene L-ascorbate oxidase homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dof zinc finger protein DOF2.4-like
    Names
    DOF domain class transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001328916.1 → NP_001315845.1  dof zinc finger protein DOF2.4-like

      Status: PROVISIONAL

      Source sequence(s)
      HM122546
      UniProtKB/TrEMBL
      D9ZIY2
      Conserved Domains (1) summary
      pfam02701
      Location:65 → 119
      zf-Dof; Dof domain, zinc finger

    RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM211411v1 Primary Assembly

    Genomic

    1. NC_041803.1 Reference ASM211411v1 Primary Assembly

      Range
      24245757..24247355
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases