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    LOC103414944 transcription repressor MYB5 [ Malus domestica (apple) ]

    Gene ID: 103414944, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC103414944
    Gene description
    transcription repressor MYB5
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Malus domestica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
    Also known as
    MYB12
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    Genomic context

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    See LOC103414944 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current ASM211411v1 (GCF_002114115.1) 3 NC_041791.1 (383640..385350)
    101 previous assembly MalDomGD1.0 (GCF_000148765.1) 3 NC_024241.1 (967146..969099)

    Chromosome 3 - NC_041791.1Genomic Context describing neighboring genes Neighboring gene importin-5-like Neighboring gene peptidyl-tRNA hydrolase, mitochondrial Neighboring gene uncharacterized LOC103407528 Neighboring gene phosphatidylinositol N-acetylglucosaminyltransferase subunit A-like Neighboring gene cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transcription repressor MYB5
    Names
    MYB domain class transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001328802.1 → NP_001315731.1  transcription repressor MYB5

      Status: PROVISIONAL

      Source sequence(s)
      HM122616
      UniProtKB/TrEMBL
      A0A498K6B0, D9ZJ52
      Conserved Domains (2) summary
      smart00717
      Location:29 → 78
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam00249
      Location:29 → 76
      Myb_DNA-binding; Myb-like DNA-binding domain

    RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM211411v1 Primary Assembly

    Genomic

    1. NC_041791.1 Reference ASM211411v1 Primary Assembly

      Range
      383640..385350
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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