U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    YABBY3 axial regulator YABBY 5 [ Malus domestica (apple) ]

    Gene ID: 103448029, updated on 22-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    YABBY3
    Gene description
    axial regulator YABBY 5
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Malus domestica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See YABBY3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current ASM211411v1 (GCF_002114115.1) 2 NC_041790.1 (2299786..2303606)
    101 previous assembly MalDomGD1.0 (GCF_000148765.1) 2 NC_024240.1 (2978043..2981824)

    Chromosome 2 - NC_041790.1Genomic Context describing neighboring genes Neighboring gene thylakoid lumenal 16.5 kDa protein, chloroplastic-like Neighboring gene methyl-CpG-binding domain-containing protein 11-like Neighboring gene nuclear pore complex protein NUP1-like Neighboring gene equilibrative nucleotide transporter 8-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in abaxial cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell fate commitment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    axial regulator YABBY 5
    Names
    YABBY domain class transcription factor

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001294102.1 → NP_001281031.1  axial regulator YABBY 5

      See identical proteins and their annotated locations for NP_001281031.1

      Status: PROVISIONAL

      Source sequence(s)
      HM122730
      UniProtKB/TrEMBL
      A0A498HUV6, D9ZJG6
      Conserved Domains (1) summary
      pfam04690
      Location:7 → 161
      YABBY; YABBY protein

    RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM211411v1 Primary Assembly

    Genomic

    1. NC_041790.1 Reference ASM211411v1 Primary Assembly

      Range
      2299786..2303606
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases