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    LOC103437922 dof zinc finger protein DOF5.4 [ Malus domestica (apple) ]

    Gene ID: 103437922, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC103437922
    Gene description
    dof zinc finger protein DOF5.4
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Malus domestica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
    Also known as
    DOF10
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC103437922 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current ASM211411v1 (GCF_002114115.1) 6 NC_041794.1 (34151241..34152781, complement)
    102 current ASM211411v1 (GCF_002114115.1) 9 NC_041797.1 (12495750..12496272)
    101 previous assembly MalDomGD1.0 (GCF_000148765.1) 6 NC_024244.1 (22205889..22207466, complement)

    Chromosome 6 - NC_041794.1Genomic Context describing neighboring genes Neighboring gene protein MICROTUBULE BINDING PROTEIN 2C-like Neighboring gene uncharacterized LOC103437921 Neighboring gene rhamnogalacturonan I rhamnosyltransferase 1-like Neighboring gene transcription factor BIM1-like

    Chromosome 9 - NC_041797.1Genomic Context describing neighboring genes Neighboring gene glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial-like Neighboring gene actin-related protein 2/3 complex subunit 1B-like Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g07650 Neighboring gene DNA-directed RNA polymerase III subunit 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dof zinc finger protein DOF5.4
    Names
    DOF domain class transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001328953.1 → NP_001315882.1  dof zinc finger protein DOF5.4

      Status: PROVISIONAL

      Source sequence(s)
      HM122541
      UniProtKB/TrEMBL
      D9ZIX7
      Conserved Domains (1) summary
      pfam02701
      Location:34 → 90
      zf-Dof; Dof domain, zinc finger

    RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM211411v1 Primary Assembly

    Genomic

    1. NC_041794.1 Reference ASM211411v1 Primary Assembly

      Range
      34151241..34152781 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference ASM211411v1 Primary Assembly

    Genomic

    1. NC_041797.1 Reference ASM211411v1 Primary Assembly

      Range
      12495750..12496272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases