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    LOC592191 protein GPR107 [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 592191, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC592191
    Gene description
    protein GPR107
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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    Genomic context

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    See LOC592191 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145610.1 (24460824..24480349, complement)
    Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577285.1 (384491..404367, complement)

    NW_022145610.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105444267 Neighboring gene folylpolyglutamate synthase, mitochondrial Neighboring gene heat shock 70 kDa protein IV-like Neighboring gene heat shock 70 kDa protein IV-like Neighboring gene uncharacterized LOC115929377

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein GPR107
    Names
    protein GPR108

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145610.1 Reference Spur_5.0 Primary Assembly

      Range
      24460824..24480349 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011678263.2 → XP_011676565.2  protein GPR107 isoform X2

      UniProtKB/TrEMBL
      A0A7M7LTJ9
      Conserved Domains (1) summary
      cl21735
      Location:277 → 561
      Lung_7-TM_R; Lung seven transmembrane receptor

    2. XM_791728.5 → XP_796821.3  protein GPR107 isoform X1

      UniProtKB/TrEMBL
      A0A7M7RF23
      Conserved Domains (1) summary
      cl21735
      Location:277 → 562
      Lung_7-TM_R; Lung seven transmembrane receptor
    Nucleotide Protein
    Heading Accession and Version

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