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LOC579012 uncharacterized protein C7orf31 [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 579012, updated on 14-Dec-2023

Summary

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Gene symbol
LOC579012
Gene description
uncharacterized protein C7orf31
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See LOC579012 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145612.1 (44147030..44168508, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003580554.1 (27401..49430, complement)

NW_022145612.1Genomic Context describing neighboring genes Neighboring gene zinc finger E-box-binding homeobox 2-like Neighboring gene zinc finger E-box-binding homeobox 2 Neighboring gene TBC1 domain family member 5 Neighboring gene dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like Neighboring gene calcium-binding mitochondrial carrier protein Aralar1-like Neighboring gene histone acetyltransferase type B catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein C7orf31; uncharacterized protein LOC579012
Names
protein of unknown function DUF4555 containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145612.1 Reference Spur_5.0 Primary Assembly

    Range
    44147030..44168508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030972130.1 → XP_030827990.1  uncharacterized protein C7orf31 isoform X1

    UniProtKB/TrEMBL
    A0A7M7MXC4
    Conserved Domains (1) summary
    pfam15093
    Location:20 → 298
    DUF4555; Domain of unknown function (DUF4555)

  2. XM_011679929.2 → XP_011678231.2  uncharacterized protein LOC579012 isoform X2

    UniProtKB/TrEMBL
    A0A7M7HI03
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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