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LOC578305 glycogen [starch] synthase, muscle [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 578305, updated on 18-Sep-2024

Summary

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Gene symbol
LOC578305
Gene description
glycogen [starch] synthase, muscle
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See LOC578305 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145603.1 (17113826..17150651, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577102.1 (63493..87869, complement)

NW_022145603.1Genomic Context describing neighboring genes Neighboring gene cytoskeleton associated protein 5 Neighboring gene aryl hydrocarbon receptor nuclear translocator like Neighboring gene transcription factor SoxD1 Neighboring gene FYVE, RhoGEF and PH domain-containing protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase, muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145603.1 Reference Spur_5.0 Primary Assembly

    Range
    17113826..17150651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030989309.1 → XP_030845169.1  glycogen [starch] synthase, muscle isoform X1

    UniProtKB/TrEMBL
    A0A7M7P4T0
    Conserved Domains (1) summary
    cd03793
    Location:42 → 633
    GT3_GSY2-like; glycogen synthase GSY2 and similar proteins

  2. XM_030989310.1 → XP_030845170.1  glycogen [starch] synthase, muscle isoform X2

    UniProtKB/TrEMBL
    A0A7M7P225
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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