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    LOC576734 TM2 domain-containing protein 1 [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 576734, updated on 12-Aug-2022

    Summary

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    Gene symbol
    LOC576734
    Gene description
    TM2 domain-containing protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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    Genomic context

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    See LOC576734 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145563.1 (387546..394498, complement)
    Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577058.1 (83881..92919)

    NW_022145563.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100889580 Neighboring gene E3 ubiquitin-protein ligase Topors-like Neighboring gene microRNA mir-31 Neighboring gene glutathione peroxidase 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    TM2 domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145563.1 Reference Spur_5.0 Primary Assembly

      Range
      387546..394498 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_777009.5 → XP_782102.1  TM2 domain-containing protein 1

      UniProtKB/TrEMBL
      A0A7M7RCM1
      Conserved Domains (1) summary
      pfam05154
      Location:104 → 153
      TM2; TM2 domain
    Nucleotide Protein
    Heading Accession and Version

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