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    LOC116409507 uncharacterized LOC116409507 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 116409507, updated on 4-Nov-2024

    Summary

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    Official Symbol
    LOC116409507provided by Xenbase
    Official Full Name
    uncharacterized LOC116409507provided by Xenbase
    Primary source
    Xenbase:XB-GENE-29095051
    See related
    Ensembl:ENSXETG00000044945 AllianceGenome:Xenbase:XB-GENE-29095051
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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    Genomic context

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    See LOC116409507 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (139892997..139894168, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116409505 Neighboring gene uncharacterized LOC116409506 Neighboring gene uncharacterized LOC116409508 Neighboring gene uncharacterized LOC116409509

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030679.2 Chromosome 3 Reference UCB_Xtro_10.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Intron-containing type I and type III IFN coexist in amphibians: refuting the concept that a retroposition event gave rise to type I IFNs. Qi Z, et al. J Immunol, 2010 May 1. PMID 20357248

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    uncharacterized protein LOC116409507
    Names
    type I interferon 11
    type I interferon 3.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      139892997..139894168 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031898167.1 → XP_031754027.1  uncharacterized protein LOC116409507

      UniProtKB/TrEMBL
      A0A1B1FFP5, A0A219UQG6
      Related
      ENSXETP00000103455.1, ENSXETT00000111203.1
    Nucleotide Protein Strain
    Heading Accession and Version

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