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    LOC115928705 receptor-type tyrosine-protein phosphatase alpha-like [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 115928705, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC115928705
    Gene description
    receptor-type tyrosine-protein phosphatase alpha-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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    Genomic context

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    See LOC115928705 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145609.1 (2116762..2122627)

    NW_022145609.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIIC subunit 3 Neighboring gene metalloendopeptidase OMA1, mitochondrial-like Neighboring gene uncharacterized LOC100888345 Neighboring gene receptor-type tyrosine-protein phosphatase kappa-like Neighboring gene acid-sensing ion channel 1B-like Neighboring gene acid-sensing ion channel 4-B-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022145609 Unplaced Scaffold Reference Spur_5.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    receptor-type tyrosine-protein phosphatase alpha-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145609.1 Reference Spur_5.0 Primary Assembly

      Range
      2116762..2122627
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030996515.1 → XP_030852375.1  receptor-type tyrosine-protein phosphatase alpha-like

      UniProtKB/TrEMBL
      A0A7M7PIX6
      Conserved Domains (1) summary
      cl28904
      Location:2 → 115
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
    Nucleotide Protein
    Heading Accession and Version

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