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    LOC115923814 lectin BRA-2-like [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 115923814, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC115923814
    Gene description
    lectin BRA-2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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    Genomic context

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    See LOC115923814 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145599.1 (24543155..24547410)

    NW_022145599.1Genomic Context describing neighboring genes Neighboring gene UPF0764 protein C16orf89 homolog Neighboring gene uncharacterized LOC100888671 Neighboring gene uncharacterized LOC115923758 Neighboring gene mucin-2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022145599 Unplaced Scaffold Reference Spur_5.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lectin BRA-2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145599.1 Reference Spur_5.0 Primary Assembly

      Range
      24543155..24547410
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030985162.1 → XP_030841022.1  lectin BRA-2-like

      UniProtKB/TrEMBL
      A0A7M7NSY8
      Conserved Domains (3) summary
      smart00034
      Location:88 → 223
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
      cd00054
      Location:48 → 82
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cl02432
      Location:3 → 41
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
    Heading Accession and Version

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